HLT-NAACL 2004 Workshop: Linking Biological Literature, Ontologies and Databases


Anthology ID:
W04-31
Month:
May 6
Year:
2004
Address:
Boston, Massachusetts, USA
Venue:
WS
SIG:
Publisher:
Association for Computational Linguistics
URL:
DOI:
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HLT-NAACL 2004 Workshop: Linking Biological Literature, Ontologies and Databases

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A Resource for Constructing Customized Test Suites for Molecular Biology Entity Identification Systems
K. Bretonnel Cohen | Lorraine Tanabe | Shuhei Kinoshita | Lawrence Hunter

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Gene/Protein/Family Name Recognition in Biomedical Literature
Asako Koike | Toshihisa Takagi

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The Language of Bioscience: Facts, Speculations, and Statements In Between
Marc Light | Xin Ying Qiu | Padmini Srinivasan

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A Study of Text Categorization for Model Organism Databases
Hongfang Liu | Cathy Wu

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Mining MEDLINE: Postulating a Beneficial Role for Curcumin Longa in Retinal Diseases
Padmini Srinivasan | Bisharah Libbus | Aditya Kumar Sehgal

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Clustering MeSH Representations of Biomedical Literature
Craig A. Struble | Chitti Dharmanolla

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Text Mining - Next Steps for Drug Discovery
William S. Hayes

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Text-mining Needs and Solutions for the Biomolecular Interaction Network Database (BIND)
Ian Donaldson

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Publisher Perspective on Broad Full-text Literature Access for Text Mining in Academic and Corporate Endeavors
William S. Hayes

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A Large Scale Terminology Resource for Biomedical Text Processing
Henk Harkema | Robert Gaizauskas | Mark Hepple | Angus Roberts | Ian Roberts | Neil Davis | Yikun Guo

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Integrated Annotation for Biomedical Information Extraction
Seth Kulick | Ann Bies | Mark Liberman | Mark Mandel | Ryan McDonald | Martha Palmer | Andrew Schein | Lyle Ungar | Scott Winters | Pete White

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Using Natural Language Processing, LocusLink and the Gene Ontology to Compare OMIM to MEDLINE
Bisharah Libbus | Halil Kilicoglu | Thomas C. Rindflesch | James G. Mork | Alan R. Aronson

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A Design Methodology for a Biomedical Literature Indexing Tool Using the Rhetoric of Science
Robert E. Mercer | Chrysanne Di Marco